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[Drosophila] FlyMine 33.0 released

Rachel Lyne via dros%40net.bio.net (by rachel from flymine.org)
Wed Feb 29 10:38:26 EST 2012


We are pleased to announce the release of *version 33.0* of FlyMine 
(www.flymine.org).

This release includes a number of website improvements as well as new 
expression data and improved RNAi data (see below).  Data from FlyBase 
has been updated to release FB2012_01 and many other data sources have 
been updated to the latest versions.

*New Expression Data*
Genome-wide RNA_seq expression data for /D. melanogaster/ have been 
added. This data was produced by the modENCODE project 
(www.modencode.org) and analysed by FlyBase, who calculated a single 
value for the expression level of each gene at each developmental stage 
or tissue (see http://flybase.org/reports/FBrf0212041.html for more 
details).  This data is available on report pages for each gene and can 
also be searched through template queries (for example: 
www.flymine.org/query/template.do?name=Gene_RNA_seq and 
www.flymine.org/query/template.do?name=RNA_seq_Genes).

*Improved RNAi Data*
RNAi data for /D. melanogaster/ is now loaded from www.genomernai.org.  
This data provides a number of new RNAi experiments and improved 
phenotype descriptions for both new and existing RNAi experiments.  See 
the RNAi templates to learn more about this data (for example: 
www.flymine.org/query/template.do?name=Gene_RNAi&scope=all and 
www.flymine.org/query/template.do?name=RNAiScreen_genes&scope=all)

For a list of all changes see http://blog.flymine.org
For a full list of data sources see 
http://www.flymine.org/release-33.0/dataCategories.do
For all types of help and feedback email support from flymine.org

The FlyMine Team

- About FlyMine -
FlyMine is an integrated database of genomic, expression and protein 
data from /Drosophila, Anopheles /and/C. elegans/.  As an integrated 
resource it is possible to run data mining queries that span domains of 
biological knowledge. FlyMine is a freely available resource.

-- 
Rachel Lyne, Ph.D.
Cambridge Systems Biology Centre,
University of Cambridge,
Tennis Court Road,
Cambridge,
CB2 1QR

+44 (0)1223 (7)60224



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