Bioperl has a module to detect signal peptides in proteins (called
It is a good start ... http://www.bioperl.org
ps: good luck
"Rama" <ramat at umich.edu> wrote in message
news:fa2a520f.0201150608.575fa835 at posting.google.com...
>> I am trying to cleave the protein at certain positions but want to
> remove the signal peptides. I was wondering the best way to remove
> them, before cleavage or after and if so how do I go about doing it
> from a perl script.
>> Thank you for your help.