Hello; I am looking for partial charge and other potential parameters
for NAD+ and ATP for use with the Amber forcefield. I am not too
familiar with Amber, but two recent references (within the last five
years) state they've done the partial charge calculations with AMPAC
(and presumably interpolated the rest), but don't describe their
results. So, no comparisons between papers or methods is possible.
Any suggestions ? Thanks for any help,