IUBio

GenBank Question

Tom Schneider toms at fcs260c2.ncifcrf.gov
Thu Jul 2 14:45:23 EST 1992


I would like to obtain processed mRNA sequences from GenBank (ie, from cap
through poly A with introns removed), with the locations of ribosome binding
sites.  I've looked at a few entries and it was not obvious to me how to do
this, or even if it is possible to obtain such a thing for every gene in the
database, without handling thousands of entries by hand.  Does somebody have
automatic tools that will do this?  Brian?  Is there enough data in the
database to do this in general?

  Tom Schneider
  National Cancer Institute
  Laboratory of Mathematical Biology
  Frederick, Maryland  21702-1201
  toms at ncifcrf.gov



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