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New data resources at TIGR

Town, Christopher D. cdtown at tigr.org
Mon Jul 21 17:19:03 EST 2003


Brian Haas has recently generated two new data resources that may be of
interest to some of you:
Tandem gene duplications  in the Arabidopsis genome. Computationally
identified sets of tandemly duplicated genes in the Arabidopsis genome.
Genes Classified by Physical Evidence Support. Retrieve gene lists based on
user-defined search criteria including matches to proteins and ESTs, or lack
Both these datasets can be accessed from the Arabidopsis Annotation Database
page http://www.tigr.org/tdb/e2k1/ath1/ath1.shtml
as well as other interesting items such as:
Segmental duplications in the Arabidopsis genome with links to duplicated
Disease resistance genes identified in Arabidopsis by their domain
signatures (mainly describing the NBS-LRR class of disease resistance
>  1000 Splicing Variations in Arabidopsis were annotated during the
incorporation of the currently available EST and full-length cDNA sequences
into the Arabidopsis gene structure annotation.
Non-consensus Splice Sites  in Arabidopsis based on high quality transcript
sequence alignments.
Missing Genes  in the Arabidopsis genome.

Please send us your  comments or suggestions.
Regards to all.
Chris Town
Associate Investigator
The Institute for Genomic Research
9712 Medical Center Drive
Rockville, MD 20850.

Office phone: 301-838-3523
To page me at TIGR: 301-838-0200
Fax: 301-838-0208

Home phone: 301-990-0878


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