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New/Updated Arabidopsis DNA 11-Mar-2000

curator at arabidopsis.org curator at arabidopsis.org
Sat Mar 11 09:16:15 EST 2000


Dear Arabidopsis researchers,

The following information is the number of Arabidopsis entries in GenBank
that are new or were updated in the last week. These sequences have been
updated in TAIR and are available for searching using TAIR BLAST and FASTA
at:

http://arabidopsis.org/blast/

http://arabidopsis.org/cgi-bin/fasta/TAIRfasta.pl

New sequences      : 9
Updated sequences  : 0
Updated annotation : 4

====================== New DNA Sequences =======================

AB034696    AB034696     2991bp    mRNA     PLN      23-FEB-2000
     Arabidopsis thaliana AVPL1 mRNA for vacuolar-pyrophosphatase like
      protein, complete cds.
     vacuolar-pyrophosphatase like protein; AVPL1.

AF145451    AF145451     1579bp    mRNA     PLN      23-FEB-2000
     Arabidopsis thaliana branched chain alpha-keto acid dehydrogenase E2
      subunit (din3) mRNA, complete cds; nuclear gene for mitochondrial
      product.
     din3; branched chain alpha-keto acid dehydrogenase E2 subunit.

AF145452    AF145452     1326bp    mRNA     PLN      23-FEB-2000
     Arabidopsis thaliana branched chain alpha-keto acid dehydrogenase E1 beta
      subunit (din4) mRNA, complete cds; nuclear gene for mitochondrial
      product.
     din4; branched chain alpha-keto acid dehydrogenase E1 beta subunit.

AF225913    AF225913     1178bp    mRNA     PLN      23-FEB-2000
     Arabidopsis thaliana putative cytochrome c biogenesis protein mRNA,
      complete cds.
     putative cytochrome c biogenesis protein precursor.

AF225966    AF225966      709bp    DNA      PLN      23-FEB-2000
     Arabidopsis thaliana peroxidase ATP A2 gene, promoter region.
     peroxidase ATP A2.

AF059510    AF059510     1907bp    mRNA     PLN      23-FEB-2000
     Arabidopsis thaliana 3-methylcrotonyl-CoA carboxylase non-biotinylated
      subunit (MCCB) mRNA, complete cds.
     MCCB; 3-methylcrotonyl-CoA carboxylase non-biotinylated subunit.

AF059511    AF059511     5280bp    DNA      PLN      23-FEB-2000
     Arabidopsis thaliana 3-methylcrotonyl-CoA carboxylase nonbiotinylated
      subunit (MCCB) gene, complete cds.
     3-methylcrotonyl-CoA carboxylase nonbiotinylated subunit; MCCB.

AF056971    AF056971     2944bp    DNA      PLN      23-FEB-2000
     Arabidopsis thaliana ribulose-1,5-bisphosphate carboxylase (RBCL) gene,
      partial cds; and carboxyltransferase beta subunit (ACCD) gene, complete
      cds; chloroplast genes for chloroplast products.
     ribulose-1,5-bisphosphate carboxylase; RBCL; carboxyltransferase beta
      subunit; ACCD.

AC024081    AC024081    82893bp    DNA      PLN      23-FEB-2000
     Arabidopsis thaliana chromosome III P1 MJK13 genomic sequence, complete
      sequence.
     HTG; MJK13.1; putative ubiquitin-conjugating enzyme, 5' partial; MJK13.2;
      thioredoxin m4; MJK13.3; putative expansin S2 precursor; MJK13.4;
      MJK13.5; MJK13.6; anther development protein, ATA20; MJK13.7; MJK13.8;
      MJK13.9; MJK13.10; MJK13.11; MJK13.12; MJK13.13; MJK13.14; MJK13.15;
      MJK13.16; putative jasmonic acid regulatory protein; MJK13.17; MJK13.18;
      MJK13.19; MJK13.20; early auxin-induced protein, IAA19; MJK13.21.


=========== Updated Sequence Features/Annotations  =============

ATH010713   AJ010713     2782bp    DNA      PLN      02-MAR-2000
     Arabidopsis thaliana fdh gene.
     fdh gene; fiddlehead protein; fdh.

ATU90264    U90264     1181bp    DNA      PLN      23-FEB-2000
     Arabidopsis thaliana bifunctional nuclease bfn1 (bfn1) gene, complete
      cds.
     bifunctional nuclease bfn1; bfn1.

AC015447    AC015447   108370bp    DNA      HTG      23-FEB-2000
     Arabidopsis thaliana chromosome I clone F24J8, *** SEQUENCING IN PROGRESS
      ***, 1 ordered pieces.
     HTG; HTGS_PHASE2.

AC020580    AC020580    95751bp    DNA      HTG      23-FEB-2000
     Arabidopsis thaliana chromosome III clone IGF-F5E6, *** SEQUENCING IN
      PROGRESS ***, 1 ordered pieces.
     HTG; HTGS_PHASE2.

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